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TCGADataTool
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TCGA Data Tool
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buildDesignMatrix
buildModel
cleanRawData
columnHeaderRiskClassSummary
downloadGenomicData
dynamicallyExploreThreshold
exampleDataTCGA
getHistologicalImages
getPotentialPredictors
importGenomicDataFile
inspectPotentialPredictors
modelMeasurementsAtThreshold
overallSurvivalPlot
progressionFreeSurvivalPlot
pullDataSlice
radiologicalImagesBatchProcessing
swimmerPlot
TCGADataToolUserInterface
JaneShenGunther`TCGADataTool`
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Examples
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Basic Examples
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Given the example data structure for project TCGA-CESC:
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