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MaXrd

Guides

  • MaXrd – Mathematica X-ray diffraction package

Tech Notes

  • Applying crystal data
  • Basic computations
  • Computations on reflections
  • Formulas in crystallography
  • Importing crystal data
  • Quick guide to conditions
  • References
  • Symmetry calculations
  • The association structure of crystallographic data
  • Using the rotation options

Symbols

  • AttenuationCoefficient
  • BraggAngle
  • ConstructDomains
  • CrystalDensity
  • CrystalFormulaUnits
  • CrystalPlot
  • DarwinWidth
  • DistortStructure
  • DomainPlot
  • EmbedStructure
  • ExpandCrystal
  • ExportCrystalData
  • ExtinctionLength
  • FindPixelClusters
  • GetAtomCoordinates
  • GetAtomicScatteringFactors
  • GetCrystalMetric
  • GetElements
  • GetLatticeParameters
  • GetLaueClass
  • GetScatteringCrossSections
  • GetSymmetryData
  • GetSymmetryOperations
  • ImportCrystalData
  • InputCheck
  • InterplanarSpacing
  • MergeDomains
  • MergeSymmetryEquivalentReflections
  • MillerNotationToList
  • MillerNotationToString
  • ReciprocalImageCheck
  • ReciprocalSpaceSimulation
  • ReflectionList
  • RelatedFunctionsGraph
  • ResetCrystalData
  • ResizeStructure
  • SimulateDiffractionPattern
  • StructureFactor
  • StructureFactorTable
  • SymmetryEquivalentPositions
  • SymmetryEquivalentReflections
  • SymmetryEquivalentReflectionsQ
  • SynthesiseStructure
  • SystematicAbsentQ
  • ToStandardSetting
  • TransformAtomicDisplacementParameters
  • UnitCellTransformation
  • $CrystalData
  • $GroupSymbolRedirect
  • $LaueClasses
  • $MaXrdPath
  • $MaXrdVersion
  • $PeriodicTable
  • $PointGroups
  • $SpaceGroups
  • $TransformationMatrices
References
Crystal data
Data from miscellaneous sources
Data from International Tables for Crystallography
​
This page contains references for the contents of this package that is gathered from external sources.
Crystal data
Entry name
Source
Access date
Local file
Aluminium
Austenite
http://www.crystallography.net/cod/9014056.html
2017–10–26
Austenite.cif
CalciumFluoride
Cobalt(II)Fluoride
Jauch, Reehuis and Schultz,​​γ-ray and neutron diffraction studies of
CoF
2
: magnetostriction, electron density and magnetic moments,​​Acta Cryst. (2004). A60, 51-57
https://doi.org/10.1107/S0108767303022803
Copper
CopperTungstenOxide
L. Kihlborg and E. Gebert,​​
CuWO
4
, a distorted Wolframite-type structure​,​​Acta Cryst. (1970). B26, 1020-1026
https://doi.org/10.1107/S0567740870003515
Corundum
H. Graafsma, M. Souhassou, A. Puig-Molina, S. Harkema, C. Lecomte and Å. Kvick,​​Towards extinction-free experimental diffraction data on
Al
2
O
3
​,​​Acta Cryst. (1998). B54, 193-195
https://doi.org/10.1107/S0108768197012949
Diamond
Ferrite
http://www.crystallography.net/cod/9008536.html
2017–10–26
Ferrite.cif
GalliumArsenide
Germanium
Glycyl-L-alanine
Ice
http://www.crystallography.net/cod/1011023.html
2017–10–30
Ice.cif
LanthanumHexaboride
http://www.crystallography.net/cod/1000057.html
2017–10–19
LaB6.cif
LithiumCobaltate
https://materialsproject.org/materials/mp-24850/
2017–10–19
LiCoO2.cif
LithiumManganesePhosphate
http://www.crystallography.net/cod/1011089.html
2017–10–26
LiMnO4P.cif
ManganeseSilicon
Nickel
OxalicAcid
Perovskite
http://www.crystallography.net/cod/1000022.html
2017–10–26
Perovskite.cif
Polonium
https://github.com/andeplane/cif2cell-lammps/tree/master/cifs
2017–10–26
Po.cif
PrussianBlue
http://crystallography.net/cod/4343748.html
2017–10–26
PrussianBlue.cif
Quartz
R.M. Hazen, L.W. Finger, R.J. Hemley, H.K. Mao,​​High-pressure crystal chemistry and amorphization of α-quartz​, ​Solid State Communications​,​Volume 72, Issue 5, 1989, Pages 507-511, ISSN 0038-1098
https://doi.org/10.1016/0038-1098(89)90607-8
2017–10–12
Silicon
Silver
Sodalite
http://www.crystallography.net/cod/1000028.html
2017–10–26
Sodalite.cif
SodiumChloride
Sphalerite
http://www.crystallography.net/cod/1100043.html
2017–10–30
ZnS.cif
Tungsten
http://www.crystallography.net/cod/9008558.html
2017–10–26
W.cif
Yoderite
http://rruff.geo.arizona.edu/AMS/download.php?id=00929.cif&down=cif
2018-05-07
Zinc
http://www.crystallography.net/cod/9008522.html
2017–10–30
Zn.cif
Local files are stored $MaXrdPath ▶ ExampleFiles ▶ CIF ▶ Default if available.
Data from International Tables for Crystallography
Data entry
Description
Symbols
Volume
Edition
Chapter
Table
Pages
Common absorption edges
wavelengths
C
3rd (2004)
4.2
4.2.2.4
206–208
Point groups
subgroups
$PointGroups
D
1st (2003)
3.4
3.4.2.7
463–467
Point groups
symbols, matrix operations
$PointGroups
A
5th (2005)
10
10.1.2.2
770–790
Scattering factors
tabulated coefficients
AtomicScatteringFactor
C
3rd (2004)
6.1
6.1.1.4
578–580
Space groups
Hall symbols
$SpaceGroups
B
2nd (1999)
1.4
A1.4.2.7
115–119
Space groups
symbols, symmetry operations
$SpaceGroups
A
5th (2005)
112–715
Transformation matrices
matrices
$TransformationMatrices
A
5th (2005)
5.1
5.1.3.1
80–83
Data from miscellaneous sources
Data entry
Description
Symbols
Authors
Title
Journal, publisher or university
Year
Link or ISBN
Periodic table
element names, atomic mass
$PeriodicTable
—
Atomic Weights of the Elements 2015
(web page)
2015
http://www.sbcs.qmul.ac.uk/iupac/AtWt/
Scattering cross sections
tabulated data for photoelectric, Rayleigh, Compton and total scattering
AttenuationCoefficient
Tom Schoonjans et al.
xraylib: a library for interactions of X-rays with matter
(web page)
September 2017 (v. 3.3.0)
https://github.com/tschoonj/xraylib
Scattering factors
tabulated coefficients
AtomicScatteringFactor
D. Waasmaier and A. Kirfel
New analytical scattering-factor functions for free atoms and ions
Acta Cryst. (1995). A51, 416-431
1995
https://doi.org/10.1107/S0108767394013292
Scattering factors
tabulated data for calculating
f
0
​,
′
f
and
″
f
AtomicScatteringFactor
D. T. Cromer and D. A. Liberman
Anomalous dispersion calculations near to and on the long-wavelength side of an absorption edge
Acta Cryst. (1981). A37, 267-268
1981
https://doi.org/10.1107/S0567739481000600
Scattering factors
tabulated data for calculating
f
0
​,
′
f
and
″
f
AtomicScatteringFactor
—
ESRF Anonymous FTP Server
(web page)
2013
http://ftp.esrf.eu/scisoft/xop2.3/DabaxFiles/
Space groups
symmetry operations of unconventional space groups
$SpaceGroups
Grosse-Kunstleve et al.
cctbx - Browse alternative space group setting
—
—
http://cci.lbl.gov/cctbx/browse_settings.html
Transformation matrices
matrices that tansforms A, B and C-centred cells
$TransformationMatrices
Carmelo Giacovazzo et al.
Fundamentals of Crystallography (p. 141)
Oxford University Press
1992 (1st. ed.)
9780198555780
Transformation matrices
matrix for transforming from crystallographicto Cartesian system
$TransformationMatrices
Maureen M. Julian
Foundations of Crystallography with Computer Applications
CRC Press
2015 (2nd ed.)
9781466552920
Unconventional space groups
Hall symbols
$SpaceGroups
R.W. Grosse-Kunstleve
cctbx - Multiple cell C or F and triple cell H settings
—
October 2001
https://cci.lbl.gov/cctbx/multiple_cell.html
Unconventional space groups
Symmetry operations and symbols of space groupsnot in the International Tables for Crystallography
$SpaceGroups
Jeremy Karl Cockcroft
A Hypertext Book of Crystallographic Space Group Diagrams and Tables
Birkbeck College, University of London
2016-02-01
http://img.chem.ucl.ac.uk/sgp/mainmenu.htm
​
​
""

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