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MaXrd

Guides

  • MaXrd – Mathematica X-ray diffraction package

Tech Notes

  • Applying crystal data
  • Basic computations
  • Computations on reflections
  • Formulas in crystallography
  • Importing crystal data
  • Quick guide to conditions
  • References
  • Symmetry calculations
  • The association structure of crystallographic data
  • Using the rotation options

Symbols

  • AttenuationCoefficient
  • BraggAngle
  • ConstructDomains
  • CrystalDensity
  • CrystalFormulaUnits
  • CrystalPlot
  • DarwinWidth
  • DistortStructure
  • DomainPlot
  • EmbedStructure
  • ExpandCrystal
  • ExportCrystalData
  • ExtinctionLength
  • FindPixelClusters
  • GetAtomCoordinates
  • GetAtomicScatteringFactors
  • GetCrystalMetric
  • GetElements
  • GetLatticeParameters
  • GetLaueClass
  • GetScatteringCrossSections
  • GetSymmetryData
  • GetSymmetryOperations
  • ImportCrystalData
  • InputCheck
  • InterplanarSpacing
  • MergeDomains
  • MergeSymmetryEquivalentReflections
  • MillerNotationToList
  • MillerNotationToString
  • ReciprocalImageCheck
  • ReciprocalSpaceSimulation
  • ReflectionList
  • RelatedFunctionsGraph
  • ResetCrystalData
  • ResizeStructure
  • SimulateDiffractionPattern
  • StructureFactor
  • StructureFactorTable
  • SymmetryEquivalentPositions
  • SymmetryEquivalentReflections
  • SymmetryEquivalentReflectionsQ
  • SynthesiseStructure
  • SystematicAbsentQ
  • ToStandardSetting
  • TransformAtomicDisplacementParameters
  • UnitCellTransformation
  • $CrystalData
  • $GroupSymbolRedirect
  • $LaueClasses
  • $MaXrdPath
  • $MaXrdVersion
  • $PeriodicTable
  • $PointGroups
  • $SpaceGroups
  • $TransformationMatrices
StianRamsnes`MaXrd`
GetAtomCoordinates
​
GetAtomCoordinates
[crystal]
extracts the atom coordinates of the
crystal
.
​
​
GetAtomCoordinates
[plot]
extracts the atom coordinates of the crystal
plot
.
​
Details and Options

Examples  
(4)
Basic Examples  
(2)
In[1]:=
GetAtomCoordinates
["OxalicAcid"]
Out[1]=
C{{-0.0454,0.0548,0.0511}},O{{0.0848,-0.06,0.1481},{-0.2201,0.2305,0.0361},{-0.4512,-0.3849,0.18}},H{{0.4643,0.4953,0.2913},{0.0588,0.1587,0.3795},{-0.3869,0.4508,0.1584}}
​
In[1]:=
plot=
CrystalPlot
["Corundum","StructureSize"{1,1,1}]
Out[1]=
In[2]:=
GetAtomCoordinates
@plot
Out[2]=
Al{{0.,0.,0.352105},{0.,0.,0.147895},{0.,0.,0.647895},{0.,0.,0.852105},{0.666667,0.333333,0.685438},{0.666667,0.333333,0.481228},{0.666667,0.333333,0.981228},{0.666667,0.333333,0.185438},{0.333333,0.666667,0.018772},{0.333333,0.666667,0.814562},{0.333333,0.666667,0.314562},{0.333333,0.666667,0.518772},{0.,1.,0.352105},{0.,1.,0.147895},{0.,1.,0.647895},{0.,1.,0.852105},{1.,0.,0.352105},{1.,0.,0.147895},{1.,0.,0.647895},{1.,0.,0.852105},{1.,1.,0.352105},{1.,1.,0.147895},{1.,1.,0.647895},{1.,1.,0.852105}},O{{0.30626,0.30626,0.25},{0.69374,0.,0.25},{0.,0.69374,0.25},{0.69374,0.69374,0.75},{0.30626,0.,0.75},{0.,0.30626,0.75},{0.972927,0.639593,0.583333},{0.360407,0.333333,0.583333},{0.666667,0.027073,0.583333},{0.360407,0.027073,0.083333},{0.972927,0.333333,0.083333},{0.666667,0.639593,0.083333},{0.639593,0.972927,0.916667},{0.027073,0.666667,0.916667},{0.333333,0.360407,0.916667},{0.027073,0.360407,0.416667},{0.639593,0.666667,0.416667},{0.333333,0.972927,0.416667},{0.69374,1.,0.25},{0.30626,1.,0.75},{1.,0.69374,0.25},{1.,0.30626,0.75}}
Options  
(2)

SeeAlso
GetCrystalMetric
 
▪
GetElements
 
▪
GetLatticeParameters
 
▪
GetSymmetryOperations
 
▪
$CrystalData
RelatedGuides
▪
MaXrd – Mathematica X-ray diffraction package
""

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