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MoleculeComplex

Guides

  • MoleculeComplex

Symbols

  • Packmol
  • FindCoordinationBonds
  • FindHydrogenBonds
  • MakeMolecule3D
  • MoleculeComplexAngle
  • MoleculeComplexAppend
  • MoleculeComplexDelete
  • MoleculeComplexDistance
  • MoleculeComplexEnergy
  • MoleculeComplexJoin
  • MoleculeComplex
  • MoleculeComplexOptimizeGeometry
  • MoleculeComplexPart
  • MoleculeComplexPlot3D
  • MoleculeComplexPosition
  • MoleculeComplexQ
  • MoleculeComplexToMolecule
  • Packmol
  • RandomRotationTransform
  • $MoleculeComplexVersion
MoleculeComplex
The
MoleculeComplex
is a symbolic representation of an ensemble of molecules in a common three-dimensional coordinate space.
MoleculeComplex Construction
MoleculeComplex
— a molecule complex specified by a list of molecules
Packmol
— use PACKMOL program to construct a molecule complex
MoleculeComplexToMolecule
— combine all the molecules in a molecule complex into a single molecule
MakeMolecule3D
▪
MoleculeComplexQ
MoleculeComplex Editing
MoleculeComplexAppend
— append a molecule to a molecule complex
MoleculeComplexDelete
— delete one or more molecules from a molecule complex
MoleculeComplexJoin
— join a list of molecules to a molecule complex
MoleculeComplexPart
— get one or more molecules from a molecule complex
MoleculeComplexPosition
— find index positions of molecules in a molecule complex
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MoleculeComplex Visualization
MoleculeComplexPlot3D
— 3D molecule complex rendering including hydrogen bonds
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MoleculeComplex Energetics
MoleculeComplexEnergy
— compute the MMFF energy of a molecule complex including intermolecular interactions
MoleculeComplexOptimizeGeometry
— minimize the MMFF enegy of a molecule complex
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