Wolfram Function Repository
Instant-use add-on functions for the Wolfram Language
Function Repository Resource:
Convert a sequence alignment to a list of positional differences from the first sequence to the second
ResourceFunction["AlignmentToPositionDifferences"][alignment] takes an alignment between two sequences and returns the positions and rules that allow the first sequence to be converted to the second. |
Reduce the result of a sequence alignment to only the positions that have been changed:
In[1]:= |
Out[1]= |
Process the result of a sequence alignment directly:
In[2]:= |
Out[2]= |
The resource function ReconstituteSequenceFromReferenceDifferences restores sequences from the positional differences produced by this sequence:
In[3]:= |
Out[3]= |
Find the differences with the COVID-19 reference sequence for a reported variant:
In[4]:= |
Out[4]= |
This work is licensed under a Creative Commons Attribution 4.0 International License