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CompartmentalModeling

Guides

  • Compartmental Modeling

Symbols

  • CompartmentalModelGraph
  • CompetitiveInhibitorKinetics
  • DefinePropensityFunction
  • DeriveTransitions
  • DynamicTransmissionModel
  • EnzymeReaction
  • EpidemiologyModelData
  • EpidemiologyModel
  • ForceOfInfection
  • HillKinetics
  • Incidence
  • KineticCompartmentalModel
  • KineticReactionNetworkModel
  • MichaelisMentenKinetics
  • NextGenerationMatrix
  • NoncompetitiveInhibitorKinetics
  • NullCompartment
  • ResolveCompartmentalModel
  • StochasticSolve
  • StoichiometryTable
  • StratifyModel
  • Transition
  • UncompetitiveInhibitorKinetics
  • VitalDemographicsModel
  • $C
  • $CompartmentalModelingVersion
  • $EpidemiologyColor
  • $EpidemiologyModelingVersion
  • $R
  • $SystemsBiologyModelingVersion
RobertNachbar`EpidemiologyModeling`
Incidence
​
Incidence
[modelData,{
c
1
,
c
2
,…}]
returns the incidence as an Association for the given dynamic transmission model data and compartments
c
i
.
​
Details

Examples  
(3)
Basic Examples  
(1)
Load the paclet:
In[1]:=
Needs["RobertNachbar`EpidemiologyModeling`"]
Generate the model data association for an SEIR model:
In[2]:=
modelData=
DynamicTransmissionModel

βλ[t]
→
ℰ,ℰ
ζ
→
ℐ,ℐ
γ
→
ℛ,t,"ForceOfInfection"{λ,ℐ};
Compute the incidence for the compartment
ℐ
:
In[3]:=
Incidence
[modelData,ℐ]
Out[3]=
ℐζℰ[t]
Generalizations & Extensions  
(1)

Applications  
(1)

SeeAlso
DynamicTransmissionModel
RelatedGuides
▪
CompartmentalModeling
""

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